Proteus Analytics — Projects
Living catalog of active work and prototypes. Naming: [project]_[model]_[paramdesc]_[YYYY-MM-DD]_vNN.ext
Active R&D
Dopamine Neuron Model (27-state, CVODE)
Active
HH-style DA neuron with AMPA/NMDA Poisson drive; CVODE solver; parameter sweeps for bursting, tonic, and single-spike regimes; stability & bifurcation next.
Reaction–Diffusion: Tissue Necrosis / Leukemia (+ Gray–Scott)
Active
Multi-species RD model (toxins, H⁺, leukemic cells, death signaling) with Gray–Scott-like behavior; 2D baseline → 3D; ARKODE/CVODE time-stepping.
Heat Diffusion Models — Sphere “Slap-Cooked Turkey”, Cube Panel
Active
Spherical heat equation with impulsive boundary forcing + cube face source comparison across BC types; validate impulse superposition and stability margins.
PDE Framework: FVM + CVODE/ARKODE (MATLAB → C)
Active
Unified scaffolding for PDE/ODE projects with HDF5 I/O, ParaView export, sweep runners, transient trimming, and Poincaré tooling.
Medical Device Algorithms via MRI PDEs (Bloch/Bloch–Torrey)
Active (scoping)
PDE-based modeling for MRI to underpin device algorithms: coil optimization, reconstruction, denoising. 2D Bloch–Torrey on simple phantoms first.
Jump Diffusion Population Model (Punctuated Equilibrium)
Planning
Population dynamics with continuous diffusion + Poisson jumps to capture evolutionary “punctuations”; explore extinction/fixation regimes.
Engineering / Software
OpenFOAM + SUNDIALS Coupling
Planning
Adapter to embed CVODE/ARKODE in FOAM workflows for stiff source terms (e.g., reactingFoam).
True Random Number Generator (Physical/Entropy-based)
Planning
Design and prototype TRNG leveraging physical noise sources (thermal, photonic, chaotic systems) with statistical validation against NIST suites.
Car Parts Cost/Repair Optimizer
Planning
Track parts, prices, and failure frequency to recommend cheapest-to-own cars.
Summoners War Monster/Rune Tracker
Active (early)
Parse SWEX/SWOP JSON to tally Arena monster usage, rune sets, and win/loss rates.
Face Recognition App (Computer Vision)
Planning
Local feature baseline with ethical guardrails; ROC evaluation on small dataset.
Meta-Classifier for AI Text Detectors
Planning
Aggregate GPTZero/Originality.ai/Copyleaks outputs into a single, better decision.
OS Manager (Recovery/Partition) — Patent Idea
On hold
Dedicated module/SSD for seamless OS recovery, partition management, and system repair.
Data & Visualization
arXiv Topic Mapper (mind-map)
Planning
Cluster trending topics and render an interactive mind-map.
Historical Math/Physics Timeline (+ TOE/Paradox Testing)
Planning
Interactive timeline of discoveries with “paradox stress-tests” for TOEs.
Neuron Geometry 3D Printing (NeuroMorpho → STL)
Planning
Convert SWC morphologies to watertight STL meshes for 3D printing and teaching.
Raccoon Tracker (packs & routines)
Planning
Simple computer-vision + time-series to track individuals and behavior.
Web & Writing
Proteus Analytics Website
Active
WordPress + MathJax, polished CSS (rounded corners, hover lift), menu build, portfolio/CV.
Publications Page & Thumbnails
Active
Create visual thumbnails from EPS in PDFs; clean publication cards with links.
Book Projects (PDEs in 3D; Dopamine Notes)
Planning
Executable examples + theory; dopamine modeling from channels to firing regimes.
Supplement Stack Tracker (Brain Recovery)
Active / Exploratory
Minimal tracking template, gentle reminders, and (optional) public log.
Exploratory / On Hold
Abaqus: Skull Fracture Simulation
On hold
Explicit FE study; geometry + fracture criteria TBD.
Van der Pol Sweeps + Poincaré Toolkit
On hold
Sweep over amp/ω, per-thread logs, plotting, and transient trimming.
Consumer HPC Hardware Research (Intel vs AMD)
On hold
Benchmark-driven workstation guidance for CVODE/PDE workloads.